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E. coli chemical tolerance resequencing and growth/production phenotyping data

software
posted on 2019-11-12, 07:31 authored by Markus Herrgard, Rebecca Lennen, Adam FeistAdam Feist, Morten Otto Alexander SommerMorten Otto Alexander Sommer, Bernhard PalssonBernhard Palsson, Alex Toftgaard NielsenAlex Toftgaard Nielsen, Elsayed Tharwat Tolba MohamedElsayed Tharwat Tolba Mohamed, Sailesh Malla, Kristian Jensen, Ksenia Chekina, Emre ÖzdemirEmre Özdemir, Anna Koza, Jerome Maury, Lasse Ebdrup PedersenLasse Ebdrup Pedersen, Nikolaus Sonnenschein, Lars Yannik Schöning
Variant calling and growth/production phenotyping data for 224 strains.<div>Jupyter notebooks (Python) to generate all figures from the data files.</div><div>All information is in a github repository and a DOI is generated through Zenodo for the version of the repository that is attached to the publication.</div><div><br></div><p></p>

Funding

Novo Nordisk Foundation

History

Related Materials

  1. 1.
    URL - References https://doi.org/10.5281/zenodo.3455843
  2. 2.
    URL - References https://github.com/biosustain/chemical-tolerance-supplementary
  3. 3.
    DOI - Is supplement to https://doi.org/10.1101/634105

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    DTU Biosustain

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    Keywords

    laboratory evolutionchemical stresschemical tolerancestress resistanceabiotic stressmetabolic engineeringcommodity chemicalsBioinformaticsBiotechnologyGenomicsMicrobiology

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    CC BY 4.0

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