Optimized DADA2 pipeline for 16S rRNA gene sequencing using IonTorrent

<p>Implementation of DADA2 for iontorrent 16S rRNA gene sequencing data as used research group for Gut, Microbe, and Health at National Food Institute, Technical University of Denmark.</p> <p><br></p> <p>The pipeline applies the current best practices for running DADA2 analysis of sequencing data from the IonTorrent platform, in a reproducible manner.</p> <p><br></p> <p>Instructions for how to install and use this pipeline is written in the README.md file.</p> <p><br></p> <p>If you have any comments, suggestions or questions regarding this pipeline, they can be submitted to the pipelines GitHub repository.</p> <p><br></p> <p> <em>© [2023] Technical University of Denmark</em> </p>