Scripts for: Thermodynamics of amyloid fibril formation from non-equilibrium experiments of growth and dissociation

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posted on 2021-03-18, 15:38 authored by Rasmus Krogh NorrildRasmus Krogh Norrild

Jupyter notebooks (Python code) used for data analysis of quartz crystal microbalance (QCM) and differential scanning fluorimetry (DSF) data of the PI3K-SH3 amyloid fibrils under study (10.11583/DTU.13681516). The analyses performed include kinetic analysis of the growth and dissociation of the fibrils as well as thermodynamical properties.

The associated data files are specified in the beginning of each of the Jupyter Notebooks.

The scripts use the Python 3.7 and packages Numpy, Matplotlib, Pandas, and LMfit.

Funding

NNFSA170028392

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Keywords

amyloid aggregates Kinetic analysis Thermodynamic analyses Biophysical analyses biochemistry data Python Biophysics

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BSD 3-Clause

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